Zm00001d042175_T001

Description : photosystem II reaction center PSB28 protein

Gene families : OG_01_0007766 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007766_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d042175_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d042175_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_812
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_68

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	ISM	GOs from InterProScan
CC	GO:0009654	photosystem II oxygen evolving complex	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	ISM	GOs from InterProScan
CC	GO:0016020	membrane	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005610	PSII_Psb28_class-1	Pfam	39	144
IPR005610	PSII_Psb28_class-1	PANTHER	22	147
IPR005610	PSII_Psb28_class-1	Hamap	36	145
IPR038676	Psb28_c1_sf	Gene3D	37	147
IPR005610	PSII_Psb28_class-1	NCBIfam	39	145
IPR038676	Psb28_c1_sf	Gene3D	37	147
IPR005610	PSII_Psb28_class-1	TIGRFAM	39	145
IPR005610	PSII_Psb28_class-1	PANTHER	22	147
IPR005610	PSII_Psb28_class-1	Hamap	36	145
IPR005610	PSII_Psb28_class-1	Pfam	39	144

No CAZYmes available for this sequence

External Links

No external refs found!