Zm00001d042180_T002

Description : vamp/synaptobrevin-associated protein 27-2

Gene families : OG_01_0008125 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008125_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d042180_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d042180_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_61
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_213

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005789	endoplasmic reticulum membrane	ISM	GOs from InterProScan
CC	GO:0016020	membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016763	VAP	PANTHER	5	399
IPR000535	MSP_dom	Pfam	6	107
IPR000535	MSP_dom	ProSiteProfiles	5	125
IPR013783	Ig-like_fold	Gene3D	2	127
IPR008962	PapD-like_sf	SUPERFAMILY	5	129
IPR000535	MSP_dom	Pfam	6	107
IPR008962	PapD-like_sf	SUPERFAMILY	5	129
IPR016763	VAP	PANTHER	4	235
IPR016763	VAP	PANTHER	251	400
IPR013783	Ig-like_fold	Gene3D	2	127
IPR000535	MSP_dom	ProSiteProfiles	5	125

No CAZYmes available for this sequence

External Links

No external refs found!