Zm00001d042362_T001

Description : Leucine-rich repeat transmembrane protein kinase

Gene families : OG_01_0002894 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002894_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d042362_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d042362_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_293
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_90

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006468	protein phosphorylation	ISM	GOs from InterProScan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR032675	LRR_dom_sf	Gene3D	49	202
IPR017441	Protein_kinase_ATP_BS	ProSitePatterns	1033	1055
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	638	662
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	590	614
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	329	353
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	258	282
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	771	794
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	210	234
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	495	519
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	138	161
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	722	751
IPR032675	LRR_dom_sf	Gene3D	304	522
IPR001611	Leu-rich_rpt	Pfam	497	519
IPR001611	Leu-rich_rpt	Pfam	379	401
IPR001611	Leu-rich_rpt	Pfam	212	234
IPR001611	Leu-rich_rpt	Pfam	405	425
IPR001611	Leu-rich_rpt	Pfam	473	495
IPR001611	Leu-rich_rpt	Pfam	702	722
IPR001611	Leu-rich_rpt	Pfam	680	698
IPR001611	Leu-rich_rpt	Pfam	850	871
IPR001611	Leu-rich_rpt	Pfam	189	210
IPR001611	Leu-rich_rpt	Pfam	331	353
IPR001611	Leu-rich_rpt	Pfam	547	566
IPR000719	Prot_kinase_dom	SMART	1027	1306
IPR032675	LRR_dom_sf	Gene3D	203	303
IPR001611	Leu-rich_rpt	Pfam	591	651
IPR001611	Leu-rich_rpt	Pfam	748	808
IPR001611	Leu-rich_rpt	Pfam	132	173
IPR032675	LRR_dom_sf	Gene3D	523	662
IPR032675	LRR_dom_sf	Gene3D	674	914
IPR000719	Prot_kinase_dom	ProSiteProfiles	1027	1306
IPR001611	Leu-rich_rpt	ProSiteProfiles	140	161
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	1009	1300
IPR001611	Leu-rich_rpt	ProSiteProfiles	616	639
IPR013210	LRR_N_plant-typ	Pfam	51	88
IPR008271	Ser/Thr_kinase_AS	ProSitePatterns	1150	1162
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	Pfam	1031	1230
IPR013210	LRR_N_plant-typ	Pfam	51	88
IPR032675	LRR_dom_sf	Gene3D	203	303
IPR001611	Leu-rich_rpt	Pfam	680	735
IPR001611	Leu-rich_rpt	Pfam	748	808
IPR001611	Leu-rich_rpt	Pfam	132	173
IPR001611	Leu-rich_rpt	Pfam	591	651
IPR032675	LRR_dom_sf	Gene3D	523	662
IPR032675	LRR_dom_sf	Gene3D	674	914
IPR000719	Prot_kinase_dom	SMART	1027	1306
IPR032675	LRR_dom_sf	Gene3D	304	522
IPR000719	Prot_kinase_dom	Pfam	1028	1297
IPR001611	Leu-rich_rpt	Pfam	495	511
IPR001611	Leu-rich_rpt	ProSiteProfiles	616	639
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	1009	1300
IPR032675	LRR_dom_sf	Gene3D	49	202
IPR008271	Ser/Thr_kinase_AS	ProSitePatterns	1150	1162
IPR017441	Protein_kinase_ATP_BS	ProSitePatterns	1033	1055
IPR001611	Leu-rich_rpt	ProSiteProfiles	140	161
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	590	614
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	638	662
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	329	353
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	258	282
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	771	794
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	210	234
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	495	519
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	138	161
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	722	751
IPR000719	Prot_kinase_dom	ProSiteProfiles	1027	1306

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d042362_T001

Expression Profile

Co-expression Networks

Functional Annotation