Zm00001d042437_T005

Description : RING domain ligase2

Gene families : OG_01_0006646 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006646_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d042437_T005
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d042437_T005
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_300
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_148

Type	GO Term	Name	Evidence	Source
BP	GO:0000209	protein polyubiquitination	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	ISM	GOs from InterProScan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0070534	protein K63-linked ubiquitination	ISM	GOs from InterProScan
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR010734	Copine_C	Pfam	135	360
IPR001841	Znf_RING	ProSiteProfiles	429	462
IPR013083	Znf_RING/FYVE/PHD	Gene3D	418	472
IPR002035	VWF_A	SMART	110	325
IPR036465	vWFA_dom_sf	SUPERFAMILY	112	308
IPR010734	Copine_C	Pfam	135	361
IPR013083	Znf_RING/FYVE/PHD	Gene3D	418	472
IPR045317	RING-HC_RGLG1/2	CDD	428	472
IPR001841	Znf_RING	ProSiteProfiles	429	462
IPR036465	vWFA_dom_sf	SUPERFAMILY	112	308
IPR002035	VWF_A	SMART	110	325

No CAZYmes available for this sequence

External Links

No external refs found!