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Description : tetratricopeptide repeat (TPR)-containing protein
Gene families : OG_01_0007189 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007189_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d042450_T002 | No neighbors in network |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d042450_T002 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_265 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR019734 | TPR_repeat | ProSiteProfiles | 328 | 361 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 300 | 372 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 319 | 604 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 424 | 607 |
| IPR019734 | TPR_repeat | Pfam | 115 | 144 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 560 | 593 |
| IPR013105 | TPR_2 | Pfam | 328 | 361 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 109 | 284 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 93 | 162 |
| IPR019734 | TPR_repeat | SMART | 560 | 593 |
| IPR019734 | TPR_repeat | SMART | 457 | 490 |
| IPR019734 | TPR_repeat | SMART | 205 | 238 |
| IPR019734 | TPR_repeat | SMART | 526 | 559 |
| IPR019734 | TPR_repeat | SMART | 491 | 523 |
| IPR019734 | TPR_repeat | SMART | 239 | 272 |
| IPR019734 | TPR_repeat | SMART | 115 | 148 |
| IPR019734 | TPR_repeat | SMART | 328 | 361 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 526 | 559 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 115 | 148 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 179 | 292 |
| IPR013105 | TPR_2 | Pfam | 328 | 361 |
| IPR019734 | TPR_repeat | Pfam | 115 | 144 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 179 | 292 |
| IPR019734 | TPR_repeat | SMART | 560 | 593 |
| IPR019734 | TPR_repeat | SMART | 457 | 490 |
| IPR019734 | TPR_repeat | SMART | 205 | 238 |
| IPR019734 | TPR_repeat | SMART | 526 | 559 |
| IPR019734 | TPR_repeat | SMART | 491 | 523 |
| IPR019734 | TPR_repeat | SMART | 239 | 272 |
| IPR019734 | TPR_repeat | SMART | 115 | 148 |
| IPR019734 | TPR_repeat | SMART | 328 | 361 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 115 | 148 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 93 | 162 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 109 | 284 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 526 | 559 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 300 | 372 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 319 | 604 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 560 | 593 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 424 | 607 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 328 | 361 |
No CAZYmes available for this sequence
| No external refs found! |