Zm00001d042451_T003

Description : Membrane trafficking VPS53 family protein

Gene families : OG_01_0003025 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003025_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d042451_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d042451_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_217
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_122

Type	GO Term	Name	Evidence	Source
CC	GO:0000938	GARP complex	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0016482	cytosolic transport	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0042147	retrograde transport, endosome to Golgi	ISM	GOs from InterProScan
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
CC	GO:0099023	vesicle tethering complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR038260	Vps53_C_sf	Gene3D	634	763
IPR031745	Vps53_C	Pfam	665	743
IPR039766	Vps53	PANTHER	4	841
IPR007234	Vps53_N	Pfam	3	436
IPR039766	Vps53	PANTHER	1	854
IPR038260	Vps53_C_sf	Gene3D	634	763
IPR007234	Vps53_N	Pfam	3	436

No CAZYmes available for this sequence

External Links

No external refs found!