Zm00001d042534_T002

Description : RING/FYVE/PHD zinc finger superfamily protein

Gene families : OG_01_0004026 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004026_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d042534_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d042534_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_96
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_172

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011016	Znf_RING-CH	ProSiteProfiles	27	87
IPR011016	Znf_RING-CH	SMART	34	81
IPR033275	MARCH-like	PANTHER	25	168
IPR011016	Znf_RING-CH	Pfam	35	80
IPR013083	Znf_RING/FYVE/PHD	Gene3D	27	91
IPR022143	DUF3675	Pfam	86	167
IPR011016	Znf_RING-CH	ProSiteProfiles	27	87
IPR011016	Znf_RING-CH	Pfam	35	80
IPR022143	DUF3675	Pfam	86	167
IPR033275	MARCH-like	PANTHER	26	168
IPR013083	Znf_RING/FYVE/PHD	Gene3D	27	91
IPR011016	Znf_RING-CH	SMART	34	81

No CAZYmes available for this sequence

External Links

No external refs found!