- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : lipoxygenase 1
Gene families : OG_01_0000612 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000612_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d042540_T008 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d042540_T008 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_245 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_59 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR000907 | LipOase | PANTHER | 51 | 892 |
| IPR001024 | PLAT/LH2_dom | SMART | 21 | 167 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 274 | 362 |
| IPR013819 | LipOase_C | ProSiteProfiles | 169 | 892 |
| IPR013819 | LipOase_C | PRINTS | 563 | 583 |
| IPR013819 | LipOase_C | PRINTS | 543 | 560 |
| IPR013819 | LipOase_C | PRINTS | 525 | 542 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 171 | 892 |
| IPR001246 | LipOase_plant | PRINTS | 162 | 183 |
| IPR001246 | LipOase_plant | PRINTS | 300 | 321 |
| IPR001246 | LipOase_plant | PRINTS | 349 | 365 |
| IPR001246 | LipOase_plant | PRINTS | 136 | 154 |
| IPR001246 | LipOase_plant | PRINTS | 233 | 252 |
| IPR001246 | LipOase_plant | PRINTS | 202 | 218 |
| IPR001246 | LipOase_plant | PRINTS | 800 | 814 |
| IPR020834 | LipOase_CS | ProSitePatterns | 570 | 580 |
| IPR013819 | LipOase_C | Pfam | 402 | 870 |
| IPR013819 | LipOase_C | Pfam | 179 | 388 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 543 | 557 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 21 | 170 |
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 23 | 167 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 35 | 166 |
| IPR001024 | PLAT/LH2_dom | Pfam | 60 | 165 |
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 23 | 167 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 543 | 557 |
| IPR013819 | LipOase_C | ProSiteProfiles | 169 | 892 |
| IPR000907 | LipOase | PANTHER | 1 | 892 |
| IPR013819 | LipOase_C | Pfam | 179 | 870 |
| IPR001024 | PLAT/LH2_dom | Pfam | 62 | 165 |
| IPR020834 | LipOase_CS | ProSitePatterns | 570 | 580 |
| IPR001024 | PLAT/LH2_dom | SMART | 21 | 167 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 171 | 892 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 35 | 166 |
| IPR013819 | LipOase_C | PRINTS | 563 | 583 |
| IPR013819 | LipOase_C | PRINTS | 543 | 560 |
| IPR013819 | LipOase_C | PRINTS | 525 | 542 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 21 | 170 |
| IPR001246 | LipOase_plant | PRINTS | 162 | 183 |
| IPR001246 | LipOase_plant | PRINTS | 300 | 321 |
| IPR001246 | LipOase_plant | PRINTS | 349 | 365 |
| IPR001246 | LipOase_plant | PRINTS | 136 | 154 |
| IPR001246 | LipOase_plant | PRINTS | 233 | 252 |
| IPR001246 | LipOase_plant | PRINTS | 202 | 218 |
| IPR001246 | LipOase_plant | PRINTS | 800 | 814 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 274 | 362 |
No CAZYmes available for this sequence
| No external refs found! |