Zm00001d042608_T002

Description : ARM repeat superfamily protein

Gene families : OG_01_0007220 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007220_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d042608_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d042608_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_267

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027413	GROEL-like_equatorial_sf	Gene3D	86	104
IPR013083	Znf_RING/FYVE/PHD	Gene3D	351	426
IPR000225	Armadillo	ProSiteProfiles	763	805
IPR003613	Ubox_domain	ProSiteProfiles	351	425
IPR003613	Ubox_domain	SMART	355	418
IPR045210	RING-Ubox_PUB	CDD	353	405
IPR003613	Ubox_domain	Pfam	352	422
IPR027410	TCP-1-like_intermed_sf	SUPERFAMILY	48	85
IPR002423	Cpn60/GroEL/TCP-1	Pfam	1	102
IPR000225	Armadillo	ProSiteProfiles	722	764
IPR000225	Armadillo	ProSiteProfiles	804	845
IPR000225	Armadillo	ProSiteProfiles	681	723
IPR011989	ARM-like	Gene3D	625	815
IPR011989	ARM-like	Gene3D	816	921
IPR000225	Armadillo	SMART	752	792
IPR000225	Armadillo	SMART	793	832
IPR000225	Armadillo	SMART	833	873
IPR000225	Armadillo	SMART	711	751
IPR000225	Armadillo	SMART	670	710
IPR027410	TCP-1-like_intermed_sf	Gene3D	50	85
IPR027409	GroEL-like_apical_dom_sf	Gene3D	1	49
IPR027409	GroEL-like_apical_dom_sf	SUPERFAMILY	1	58
IPR000225	Armadillo	Pfam	752	791
IPR000225	Armadillo	Pfam	674	709
IPR016024	ARM-type_fold	SUPERFAMILY	641	913
IPR045210	RING-Ubox_PUB	CDD	356	398
IPR003613	Ubox_domain	Pfam	352	422
IPR000225	Armadillo	ProSiteProfiles	681	723
IPR011989	ARM-like	Gene3D	625	815
IPR011989	ARM-like	Gene3D	816	921
IPR000225	Armadillo	SMART	752	792
IPR000225	Armadillo	SMART	833	873
IPR000225	Armadillo	SMART	793	832
IPR000225	Armadillo	SMART	670	710
IPR000225	Armadillo	SMART	711	751
IPR027409	GroEL-like_apical_dom_sf	Gene3D	1	49
IPR000225	Armadillo	ProSiteProfiles	804	845
IPR027410	TCP-1-like_intermed_sf	SUPERFAMILY	48	85
IPR000225	Armadillo	ProSiteProfiles	763	805
IPR013083	Znf_RING/FYVE/PHD	Gene3D	351	426
IPR000225	Armadillo	Pfam	752	791
IPR000225	Armadillo	Pfam	673	709
IPR027410	TCP-1-like_intermed_sf	Gene3D	50	85
IPR027413	GROEL-like_equatorial_sf	Gene3D	86	102
IPR003613	Ubox_domain	ProSiteProfiles	351	425
IPR027409	GroEL-like_apical_dom_sf	SUPERFAMILY	1	58
IPR002423	Cpn60/GroEL/TCP-1	Pfam	1	102
IPR016024	ARM-type_fold	SUPERFAMILY	641	913
IPR003613	Ubox_domain	SMART	355	418
IPR000225	Armadillo	ProSiteProfiles	722	764

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d042608_T002

Expression Profile

Co-expression Networks

Functional Annotation