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  5. Zm00001d042686_T001

Zm00001d042686_T001


Description : C2H2 and C2HC zinc fingers superfamily protein


Gene families : OG_01_0011434 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011434_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d042686_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d042686_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_292
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_238


Type GO Term Name Evidence Source
BP GO:0010044 response to aluminum ion ISM GOs from InterProScan
BP GO:0010447 response to acidic pH ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036236 Znf_C2H2_sf SUPERFAMILY 275 302
IPR013087 Znf_C2H2_type SMART 364 386
IPR013087 Znf_C2H2_type SMART 277 299
IPR013087 Znf_C2H2_type SMART 326 359
IPR013087 Znf_C2H2_type ProSitePatterns 279 299
IPR013087 Znf_C2H2_type ProSiteProfiles 277 304
IPR044300 STOP1/2 PANTHER 70 438
IPR013087 Znf_C2H2_type ProSitePatterns 279 299
IPR013087 Znf_C2H2_type ProSiteProfiles 277 304
IPR036236 Znf_C2H2_sf SUPERFAMILY 275 302
IPR013087 Znf_C2H2_type SMART 364 386
IPR013087 Znf_C2H2_type SMART 277 299
IPR013087 Znf_C2H2_type SMART 326 359
IPR044300 STOP1/2 PANTHER 31 507

No CAZYmes available for this sequence

No external refs found!