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  5. Zm00001d042761_T001

Zm00001d042761_T001


Description : sorting nexin 1


Gene families : OG_01_0014673 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014673_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d042761_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d042761_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_242
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_236


Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001683 PX_dom Pfam 142 223
IPR001683 PX_dom ProSiteProfiles 109 228
IPR036871 PX_dom_sf SUPERFAMILY 108 225
IPR015404 Vps5_C Pfam 254 390
IPR001683 PX_dom SMART 108 224
IPR036871 PX_dom_sf Gene3D 107 234
IPR027267 AH/BAR_dom_sf Gene3D 266 466
IPR027267 AH/BAR_dom_sf SUPERFAMILY 272 464
IPR001683 PX_dom Pfam 143 223
IPR015404 Vps5_C Pfam 253 390
IPR036871 PX_dom_sf SUPERFAMILY 108 225
IPR027267 AH/BAR_dom_sf Gene3D 266 466
IPR036871 PX_dom_sf Gene3D 107 234
IPR001683 PX_dom ProSiteProfiles 109 228
IPR001683 PX_dom SMART 108 224
IPR027267 AH/BAR_dom_sf SUPERFAMILY 272 464

No CAZYmes available for this sequence

No external refs found!