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  5. Zm00001d042939_T002

Zm00001d042939_T002


Description : Cation efflux family protein


Gene families : OG_01_0004694 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004694_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d042939_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d042939_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_97
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_8


Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport ISM GOs from InterProScan
MF GO:0008324 monoatomic cation transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002524 Cation_efflux Pfam 118 326
IPR027469 Cation_efflux_TMD_sf SUPERFAMILY 112 327
IPR036837 Cation_efflux_CTD_sf Gene3D 328 408
IPR002524 Cation_efflux NCBIfam 117 407
IPR027469 Cation_efflux_TMD_sf Gene3D 116 325
IPR036837 Cation_efflux_CTD_sf SUPERFAMILY 329 407
IPR027470 Cation_efflux_CTD Pfam 336 406
IPR027469 Cation_efflux_TMD_sf Gene3D 116 325
IPR036837 Cation_efflux_CTD_sf Gene3D 328 408
IPR036837 Cation_efflux_CTD_sf SUPERFAMILY 329 407
IPR002524 Cation_efflux TIGRFAM 117 407
IPR027470 Cation_efflux_CTD Pfam 335 406
IPR002524 Cation_efflux Pfam 118 326
IPR027469 Cation_efflux_TMD_sf SUPERFAMILY 112 327

No CAZYmes available for this sequence

No external refs found!