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  5. Zm00001d043080_T001

Zm00001d043080_T001


Description : RNA-binding KH domain-containing protein


Gene families : OG_01_0013550 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013550_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d043080_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d043080_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_305
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_45


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036612 KH_dom_type_1_sf Gene3D 27 269
IPR032377 STAR_dimer Pfam 29 76
IPR045071 BBP-like PANTHER 32 263
IPR004088 KH_dom_type_1 Pfam 154 182
IPR004087 KH_dom SMART 137 237
IPR036612 KH_dom_type_1_sf SUPERFAMILY 143 259
IPR032377 STAR_dimer Pfam 29 77
IPR036612 KH_dom_type_1_sf SUPERFAMILY 143 259
IPR004088 KH_dom_type_1 Pfam 142 185
IPR036612 KH_dom_type_1_sf Gene3D 27 269
IPR045071 BBP-like PANTHER 2 285
IPR004087 KH_dom SMART 137 237

No CAZYmes available for this sequence

No external refs found!