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  5. Zm00001d043182_T001

Zm00001d043182_T001


Description : 4-(cytidine 5\'-phospho)-2-C-methyl-D-erithritol kinase


Gene families : OG_01_0013685 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013685_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d043182_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d043182_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_192
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_205


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0016114 terpenoid biosynthetic process ISM GOs from InterProScan
MF GO:0050515 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013750 GHMP_kinase_C_dom Pfam 289 359
IPR006204 GHMP_kinase_N_dom Pfam 178 233
IPR036554 GHMP_kinase_C_sf SUPERFAMILY 255 352
IPR020568 Ribosomal_Su5_D2-typ_SF SUPERFAMILY 95 247
IPR004424 IspE NCBIfam 93 347
IPR036554 GHMP_kinase_C_sf Gene3D 254 356
IPR014721 Ribsml_uS5_D2-typ_fold_subgr Gene3D 77 249
IPR004424 IspE Hamap 93 370
IPR013750 GHMP_kinase_C_dom Pfam 295 359
IPR004424 IspE Hamap 93 370
IPR006204 GHMP_kinase_N_dom Pfam 178 231
IPR004424 IspE PANTHER 57 392
IPR036554 GHMP_kinase_C_sf SUPERFAMILY 255 352
IPR004424 IspE TIGRFAM 93 347
IPR036554 GHMP_kinase_C_sf Gene3D 254 356
IPR014721 Ribsml_uS5_D2-typ_fold_subgr Gene3D 77 249
IPR020568 Ribosomal_Su5_D2-typ_SF SUPERFAMILY 95 247

No CAZYmes available for this sequence

No external refs found!