Zm00001d043494_T005

Description : elongation factor family protein

Gene families : OG_01_0000827 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000827_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d043494_T005
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d043494_T005
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_146
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_193

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR047042	BipA_II	CDD	267	364
IPR009000	Transl_B-barrel_sf	SUPERFAMILY	209	365
IPR048876	BipA_C	Pfam	592	687
IPR000795	T_Tr_GTP-bd_dom	PRINTS	126	136
IPR000795	T_Tr_GTP-bd_dom	PRINTS	142	153
IPR000795	T_Tr_GTP-bd_dom	PRINTS	66	79
IPR000795	T_Tr_GTP-bd_dom	PRINTS	106	114
IPR000795	T_Tr_GTP-bd_dom	PRINTS	178	187
IPR000795	T_Tr_GTP-bd_dom	ProSiteProfiles	62	260
IPR000640	EFG_V-like	Pfam	503	585
IPR042116	TypA/BipA_C	Gene3D	590	670
IPR035647	EFG_III/V	SUPERFAMILY	436	493
IPR027417	P-loop_NTPase	Gene3D	62	260
IPR027417	P-loop_NTPase	SUPERFAMILY	59	269
IPR006298	BipA	NCBIfam	64	687
IPR031157	G_TR_CS	ProSitePatterns	99	114
IPR047041	BipA_GTP-bd_dom	CDD	64	259
IPR005225	Small_GTP-bd_dom	NCBIfam	64	206
IPR000795	T_Tr_GTP-bd_dom	Pfam	63	258
IPR035647	EFG_III/V	SUPERFAMILY	504	620
IPR035647	EFG_III/V	SUPERFAMILY	436	493
IPR042116	TypA/BipA_C	Gene3D	590	670
IPR009000	Transl_B-barrel_sf	SUPERFAMILY	209	365
IPR000795	T_Tr_GTP-bd_dom	PRINTS	126	136
IPR000795	T_Tr_GTP-bd_dom	PRINTS	142	153
IPR000795	T_Tr_GTP-bd_dom	PRINTS	66	79
IPR000795	T_Tr_GTP-bd_dom	PRINTS	106	114
IPR000795	T_Tr_GTP-bd_dom	PRINTS	178	187
IPR005225	Small_GTP-bd_dom	TIGRFAM	64	206
IPR000795	T_Tr_GTP-bd_dom	Pfam	63	258
IPR027417	P-loop_NTPase	SUPERFAMILY	59	269
IPR035647	EFG_III/V	SUPERFAMILY	504	620
IPR006298	BipA	TIGRFAM	64	687
IPR000640	EFG_V-like	Pfam	503	585
IPR027417	P-loop_NTPase	Gene3D	62	260
IPR031157	G_TR_CS	ProSitePatterns	99	114
IPR000795	T_Tr_GTP-bd_dom	ProSiteProfiles	62	260

No CAZYmes available for this sequence

External Links

No external refs found!