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  5. Zm00001d043727_T001

Zm00001d043727_T001


Description : farnesyl diphosphate synthase 1


Gene families : OG_01_0005649 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005649_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d043727_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d043727_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_20
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_33


Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process ISM GOs from InterProScan
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR039702 FPS1-like PANTHER 16 355
IPR000092 Polyprenyl_synt Pfam 46 309
IPR008949 Isoprenoid_synthase_dom_sf Gene3D 8 354
IPR000092 Polyprenyl_synt CDD 43 353
IPR033749 Polyprenyl_synt_CS ProSitePatterns 103 117
IPR008949 Isoprenoid_synthase_dom_sf SUPERFAMILY 21 354
IPR033749 Polyprenyl_synt_CS ProSitePatterns 237 249
IPR033749 Polyprenyl_synt_CS ProSitePatterns 237 249
IPR008949 Isoprenoid_synthase_dom_sf Gene3D 8 354
IPR000092 Polyprenyl_synt Pfam 46 309
IPR039702 FPS1-like PANTHER 9 355
IPR033749 Polyprenyl_synt_CS ProSitePatterns 103 117
IPR000092 Polyprenyl_synt CDD 43 353
IPR008949 Isoprenoid_synthase_dom_sf SUPERFAMILY 21 354

No CAZYmes available for this sequence

No external refs found!