Zm00001d043988_T001

Description : chitinase A

Gene families : OG_01_0002770 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002770_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d043988_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d043988_T001	No neighbors in network
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_227

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001223	Glyco_hydro18_cat	Pfam	29	254
IPR001579	Glyco_hydro_18_chit_AS	ProSitePatterns	145	153
IPR001223	Glyco_hydro18_cat	ProSiteProfiles	27	295
IPR045321	Cts1-like	CDD	27	293
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	24	291
IPR045321	Cts1-like	CDD	27	293
IPR001579	Glyco_hydro_18_chit_AS	ProSitePatterns	145	153
IPR001223	Glyco_hydro18_cat	Pfam	29	277
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	24	291
IPR001223	Glyco_hydro18_cat	ProSiteProfiles	27	295

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH18	296	296	4.8e-27	27	243

External Links

No external refs found!