Zm00001d044074_T001

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein

Gene families : OG_01_0017263 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017263_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d044074_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d044074_T001	No neighbors in network
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_54

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036855	Znf_CCCH_sf	SUPERFAMILY	307	342
IPR000571	Znf_CCCH	ProSiteProfiles	310	338
IPR000571	Znf_CCCH	ProSiteProfiles	348	376
IPR036855	Znf_CCCH_sf	SUPERFAMILY	345	374
IPR045877	ZFP36-like	PANTHER	73	376
IPR000571	Znf_CCCH	Pfam	312	336
IPR000571	Znf_CCCH	SMART	348	375
IPR000571	Znf_CCCH	SMART	310	337
IPR000571	Znf_CCCH	Pfam	312	336
IPR045877	ZFP36-like	PANTHER	68	381
IPR000571	Znf_CCCH	ProSiteProfiles	348	376
IPR000571	Znf_CCCH	ProSiteProfiles	310	338
IPR036855	Znf_CCCH_sf	SUPERFAMILY	345	374
IPR000571	Znf_CCCH	SMART	310	337
IPR000571	Znf_CCCH	SMART	348	375
IPR036855	Znf_CCCH_sf	SUPERFAMILY	307	342

No CAZYmes available for this sequence

External Links

No external refs found!