Zm00001d044277_T002

Description : translation elongation factor Ts (EF-Ts), putative

Gene families : OG_01_0006378 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006378_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d044277_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d044277_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_114
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_108

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006414	translational elongation	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001816	Transl_elong_EFTs/EF1B	NCBIfam	59	386
IPR014039	Transl_elong_EFTs/EF1B_dimer	Pfam	125	374
IPR036402	EF-Ts_dimer_sf	Gene3D	219	373
IPR009060	UBA-like_sf	SUPERFAMILY	60	109
IPR001816	Transl_elong_EFTs/EF1B	PANTHER	50	382
IPR036402	EF-Ts_dimer_sf	Gene3D	110	215
IPR001816	Transl_elong_EFTs/EF1B	Hamap	60	392
IPR036402	EF-Ts_dimer_sf	SUPERFAMILY	111	374
IPR018101	Transl_elong_Ts_CS	ProSitePatterns	129	139
IPR036402	EF-Ts_dimer_sf	Gene3D	219	373
IPR036402	EF-Ts_dimer_sf	SUPERFAMILY	111	374
IPR018101	Transl_elong_Ts_CS	ProSitePatterns	129	139
IPR001816	Transl_elong_EFTs/EF1B	PANTHER	35	382
IPR014039	Transl_elong_EFTs/EF1B_dimer	Pfam	125	374
IPR036402	EF-Ts_dimer_sf	Gene3D	110	215
IPR001816	Transl_elong_EFTs/EF1B	Hamap	60	392
IPR001816	Transl_elong_EFTs/EF1B	TIGRFAM	59	386
IPR009060	UBA-like_sf	SUPERFAMILY	60	109

No CAZYmes available for this sequence

External Links

No external refs found!