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  5. Zm00001d044432_T010

Zm00001d044432_T010


Description : LisH dimerisation motif;WD40/YVTN repeat-like-containing domain


Gene families : OG_01_0007042 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007042_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d044432_T010
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d044432_T010
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_24


Type GO Term Name Evidence Source
MF GO:0003714 transcription corepressor activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019775 WD40_repeat_CS ProSitePatterns 661 675
IPR006594 LisH Pfam 10 36
IPR001680 WD40_rpt Pfam 768 802
IPR001680 WD40_rpt Pfam 855 888
IPR001680 WD40_rpt Pfam 606 631
IPR001680 WD40_rpt Pfam 637 674
IPR001680 WD40_rpt Pfam 681 718
IPR001680 WD40_rpt ProSiteProfiles 857 889
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 729 889
IPR001680 WD40_rpt ProSiteProfiles 685 727
IPR001680 WD40_rpt ProSiteProfiles 642 683
IPR006594 LisH ProSiteProfiles 8 40
IPR001680 WD40_rpt SMART 808 847
IPR001680 WD40_rpt SMART 593 632
IPR001680 WD40_rpt SMART 721 760
IPR001680 WD40_rpt SMART 635 674
IPR001680 WD40_rpt SMART 678 718
IPR001680 WD40_rpt SMART 764 802
IPR001680 WD40_rpt SMART 849 889
IPR001680 WD40_rpt ProSiteProfiles 600 631
IPR006594 LisH SMART 8 40
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 510 728
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 601 889
IPR044716 LEUNIG-like PANTHER 1 889
IPR001680 WD40_rpt Pfam 682 718
IPR001680 WD40_rpt Pfam 767 802
IPR001680 WD40_rpt Pfam 607 631
IPR001680 WD40_rpt Pfam 640 674
IPR006594 LisH SMART 8 40
IPR019775 WD40_repeat_CS ProSitePatterns 661 675
IPR001680 WD40_rpt ProSiteProfiles 685 727
IPR001680 WD40_rpt ProSiteProfiles 600 631
IPR006594 LisH Pfam 10 36
IPR001680 WD40_rpt ProSiteProfiles 857 889
IPR006594 LisH ProSiteProfiles 8 40
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 729 889
IPR001680 WD40_rpt ProSiteProfiles 642 683
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 510 728
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 601 889
IPR001680 WD40_rpt SMART 808 847
IPR001680 WD40_rpt SMART 593 632
IPR001680 WD40_rpt SMART 721 760
IPR001680 WD40_rpt SMART 635 674
IPR001680 WD40_rpt SMART 678 718
IPR001680 WD40_rpt SMART 764 802
IPR001680 WD40_rpt SMART 849 889

No CAZYmes available for this sequence

No external refs found!