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  5. Zm00001d044481_T002

Zm00001d044481_T002


Description : floral homeotic protein (HUA1)


Gene families : OG_01_0004885 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004885_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d044481_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d044481_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_736
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_8


Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000571 Znf_CCCH ProSiteProfiles 242 270
IPR000571 Znf_CCCH Pfam 143 168
IPR000571 Znf_CCCH Pfam 245 269
IPR000571 Znf_CCCH Pfam 383 407
IPR000571 Znf_CCCH ProSiteProfiles 191 218
IPR036855 Znf_CCCH_sf SUPERFAMILY 243 269
IPR000571 Znf_CCCH SMART 381 408
IPR000571 Znf_CCCH SMART 191 217
IPR000571 Znf_CCCH SMART 242 269
IPR000571 Znf_CCCH SMART 141 168
IPR000571 Znf_CCCH ProSiteProfiles 141 169
IPR036855 Znf_CCCH_sf SUPERFAMILY 380 410
IPR036855 Znf_CCCH_sf SUPERFAMILY 142 168
IPR000571 Znf_CCCH ProSiteProfiles 381 409
IPR036855 Znf_CCCH_sf SUPERFAMILY 142 168
IPR036855 Znf_CCCH_sf SUPERFAMILY 380 410
IPR000571 Znf_CCCH Pfam 384 408
IPR000571 Znf_CCCH Pfam 245 269
IPR000571 Znf_CCCH Pfam 143 168
IPR045877 ZFP36-like PANTHER 338 436
IPR045877 ZFP36-like PANTHER 34 333
IPR000571 Znf_CCCH SMART 381 408
IPR000571 Znf_CCCH SMART 191 217
IPR000571 Znf_CCCH SMART 242 269
IPR000571 Znf_CCCH SMART 141 168
IPR000571 Znf_CCCH ProSiteProfiles 191 218
IPR000571 Znf_CCCH ProSiteProfiles 242 270
IPR000571 Znf_CCCH ProSiteProfiles 381 409
IPR036855 Znf_CCCH_sf SUPERFAMILY 243 269
IPR000571 Znf_CCCH ProSiteProfiles 141 169

No CAZYmes available for this sequence

No external refs found!