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  5. Zm00001d044599_T001

Zm00001d044599_T001


Description : phototropin 1


Gene families : OG_01_0000881 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000881_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d044599_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d044599_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_142
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_129


Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006468 protein phosphorylation ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000014 PAS ProSiteProfiles 114 187
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 703 715
IPR011009 Kinase-like_dom_sf SUPERFAMILY 561 894
IPR035965 PAS-like_dom_sf SUPERFAMILY 404 503
IPR000014 PAS CDD 141 230
IPR000014 PAS NCBIfam 413 511
IPR000014 PAS NCBIfam 138 232
IPR000700 PAS-assoc_C ProSiteProfiles 188 242
IPR000014 PAS SMART 116 185
IPR000014 PAS SMART 390 459
IPR000719 Prot_kinase_dom Pfam 585 870
IPR000719 Prot_kinase_dom SMART 582 870
IPR001610 PAC SMART 191 233
IPR001610 PAC SMART 465 507
IPR000719 Prot_kinase_dom ProSiteProfiles 582 870
IPR035965 PAS-like_dom_sf SUPERFAMILY 134 231
IPR000014 PAS Pfam 135 231
IPR000014 PAS Pfam 411 506
IPR000014 PAS CDD 403 503
IPR000700 PAS-assoc_C ProSiteProfiles 462 516
IPR000014 PAS ProSiteProfiles 392 461
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 588 611
IPR001610 PAC SMART 191 233
IPR001610 PAC SMART 465 507
IPR000719 Prot_kinase_dom Pfam 585 870
IPR011009 Kinase-like_dom_sf SUPERFAMILY 561 894
IPR000700 PAS-assoc_C ProSiteProfiles 188 242
IPR000014 PAS ProSiteProfiles 392 461
IPR035965 PAS-like_dom_sf SUPERFAMILY 404 503
IPR000719 Prot_kinase_dom SMART 582 870
IPR000014 PAS CDD 141 230
IPR000014 PAS ProSiteProfiles 114 187
IPR000700 PAS-assoc_C ProSiteProfiles 462 516
IPR000014 PAS CDD 403 503
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 588 611
IPR000014 PAS TIGRFAM 413 511
IPR000014 PAS TIGRFAM 138 232
IPR035965 PAS-like_dom_sf SUPERFAMILY 134 231
IPR000719 Prot_kinase_dom ProSiteProfiles 582 870
IPR000014 PAS Pfam 135 231
IPR000014 PAS Pfam 411 506
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 703 715
IPR000014 PAS SMART 116 185
IPR000014 PAS SMART 390 459

No CAZYmes available for this sequence

No external refs found!