Zm00001d044648_T003

Description : alpha-L-arabinofuranosidase 1

Gene families : OG_01_0000348 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000348_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d044648_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d044648_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_249
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_120

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019321	pentose metabolic process	None	Extended
BP	GO:0019566	arabinose metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046373	L-arabinose metabolic process	ISM	GOs from InterProScan
MF	GO:0046556	alpha-L-arabinofuranosidase activity	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013780	Glyco_hydro_b	Gene3D	566	679
IPR010720	Alpha-L-AF_C	Pfam	484	672
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	229	572
IPR010720	Alpha-L-AF_C	SMART	483	672
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	94	250
IPR010720	Alpha-L-AF_C	SMART	483	672
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	94	250
IPR010720	Alpha-L-AF_C	Pfam	484	672
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	229	572
IPR013780	Glyco_hydro_b	Gene3D	566	679

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH51	630	690	7.3e-99	198	679

External Links

No external refs found!