Zm00001d044845_T001

Description : binding

Gene families : OG_01_0009364 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009364_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d044845_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d044845_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_130
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_122

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
MF	GO:0008017	microtubule binding	ISM	GOs from InterProScan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010330	cellulose synthase complex	ISM	GOs from InterProScan
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010962	regulation of glucan biosynthetic process	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032881	regulation of polysaccharide metabolic process	None	Extended
BP	GO:0032885	regulation of polysaccharide biosynthetic process	None	Extended
BP	GO:0032950	regulation of beta-glucan metabolic process	None	Extended
BP	GO:0032951	regulation of beta-glucan biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0043255	regulation of carbohydrate biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051211	anisotropic cell growth	ISM	GOs from InterProScan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2001006	regulation of cellulose biosynthetic process	ISM	GOs from InterProScan

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016024	ARM-type_fold	SUPERFAMILY	1608	1997
IPR000225	Armadillo	ProSiteProfiles	568	610
IPR016024	ARM-type_fold	SUPERFAMILY	87	489
IPR000225	Armadillo	SMART	1343	1381
IPR000225	Armadillo	SMART	849	891
IPR000225	Armadillo	SMART	1510	1549
IPR000225	Armadillo	SMART	343	392
IPR000225	Armadillo	SMART	1638	1677
IPR000225	Armadillo	SMART	765	803
IPR000225	Armadillo	SMART	1426	1467
IPR000225	Armadillo	SMART	126	167
IPR000225	Armadillo	SMART	516	555
IPR000225	Armadillo	SMART	1468	1508
IPR000225	Armadillo	SMART	599	639
IPR000225	Armadillo	SMART	1213	1256
IPR000225	Armadillo	SMART	300	341
IPR000225	Armadillo	SMART	1258	1299
IPR000225	Armadillo	SMART	168	208
IPR000225	Armadillo	SMART	1886	1926
IPR000225	Armadillo	SMART	557	597
IPR000225	Armadillo	SMART	1760	1798
IPR011989	ARM-like	Gene3D	82	515
IPR011989	ARM-like	Gene3D	1396	1680
IPR044297	CSI1/2/3	PANTHER	2033	2081
IPR016024	ARM-type_fold	SUPERFAMILY	1207	1385
IPR000225	Armadillo	Pfam	557	596
IPR011989	ARM-like	Gene3D	899	1395
IPR016024	ARM-type_fold	SUPERFAMILY	529	1162
IPR011989	ARM-like	Gene3D	679	898
IPR016024	ARM-type_fold	SUPERFAMILY	370	679
IPR011989	ARM-like	Gene3D	1681	2003
IPR011989	ARM-like	Gene3D	517	678
IPR016024	ARM-type_fold	SUPERFAMILY	1341	1680
IPR016024	ARM-type_fold	SUPERFAMILY	87	489
IPR016024	ARM-type_fold	SUPERFAMILY	1608	1997
IPR016024	ARM-type_fold	SUPERFAMILY	1207	1385
IPR011989	ARM-like	Gene3D	1681	2003
IPR011989	ARM-like	Gene3D	679	898
IPR044297	CSI1/2/3	PANTHER	1944	2035
IPR044297	CSI1/2/3	PANTHER	54	1944
IPR011989	ARM-like	Gene3D	517	678
IPR044297	CSI1/2/3	PANTHER	2034	2081
IPR000225	Armadillo	SMART	1343	1381
IPR000225	Armadillo	SMART	849	891
IPR000225	Armadillo	SMART	343	392
IPR000225	Armadillo	SMART	1510	1549
IPR000225	Armadillo	SMART	1638	1677
IPR000225	Armadillo	SMART	765	803
IPR000225	Armadillo	SMART	1426	1467
IPR000225	Armadillo	SMART	126	167
IPR000225	Armadillo	SMART	516	555
IPR000225	Armadillo	SMART	1468	1508
IPR000225	Armadillo	SMART	599	639
IPR000225	Armadillo	SMART	1213	1256
IPR000225	Armadillo	SMART	300	341
IPR000225	Armadillo	SMART	1258	1299
IPR000225	Armadillo	SMART	168	208
IPR000225	Armadillo	SMART	1886	1926
IPR000225	Armadillo	SMART	557	597
IPR000225	Armadillo	SMART	1760	1798
IPR016024	ARM-type_fold	SUPERFAMILY	529	1162
IPR000225	Armadillo	ProSiteProfiles	568	610
IPR000225	Armadillo	Pfam	557	596
IPR016024	ARM-type_fold	SUPERFAMILY	370	679
IPR011989	ARM-like	Gene3D	899	1395
IPR016024	ARM-type_fold	SUPERFAMILY	1341	1680
IPR011989	ARM-like	Gene3D	82	515
IPR011989	ARM-like	Gene3D	1396	1680

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d044845_T001

Expression Profile

Co-expression Networks

Functional Annotation