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  5. Zm00001d045098_T001

Zm00001d045098_T001


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_01_0006836 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006836_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d045098_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d045098_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_17
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_82


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0060918 auxin transport ISM GOs from InterProScan
BP GO:0099402 plant organ development ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000210 BTB/POZ_dom Pfam 30 120
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 22 118
IPR027356 NPH3_dom Pfam 209 463
IPR011333 SKP1/BTB/POZ_sf Gene3D 22 125
IPR043454 NPH3/RPT2-like PANTHER 28 537
IPR000210 BTB/POZ_dom ProSiteProfiles 31 99
IPR027356 NPH3_dom ProSiteProfiles 209 487
IPR027356 NPH3_dom ProSiteProfiles 209 487
IPR011333 SKP1/BTB/POZ_sf Gene3D 22 125
IPR043454 NPH3/RPT2-like PANTHER 4 621
IPR027356 NPH3_dom Pfam 209 463
IPR000210 BTB/POZ_dom ProSiteProfiles 31 99
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 22 118
IPR000210 BTB/POZ_dom Pfam 30 118

No CAZYmes available for this sequence

No external refs found!