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  5. Zm00001d045472_T002

Zm00001d045472_T002


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0010958 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010958_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d045472_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d045472_T002 No neighbors in network
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_251


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 244 397
IPR001680 WD40_rpt Pfam 15 51
IPR001680 WD40_rpt Pfam 342 378
IPR001680 WD40_rpt ProSiteProfiles 19 60
IPR001680 WD40_rpt SMART 75 117
IPR001680 WD40_rpt SMART 297 336
IPR001680 WD40_rpt SMART 339 378
IPR001680 WD40_rpt SMART 12 51
IPR001680 WD40_rpt ProSiteProfiles 346 379
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 9 387
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 8 243
IPR019775 WD40_repeat_CS ProSitePatterns 365 379
IPR001680 WD40_rpt SMART 75 117
IPR001680 WD40_rpt SMART 297 336
IPR001680 WD40_rpt SMART 339 378
IPR001680 WD40_rpt SMART 12 51
IPR001680 WD40_rpt ProSiteProfiles 19 60
IPR001680 WD40_rpt ProSiteProfiles 346 379
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 9 387
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 8 243
IPR001680 WD40_rpt Pfam 15 51
IPR001680 WD40_rpt Pfam 342 378
IPR019775 WD40_repeat_CS ProSitePatterns 365 379
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 244 397

No CAZYmes available for this sequence

No external refs found!