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  5. Zm00001d045492_T004

Zm00001d045492_T004


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0011254 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011254_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d045492_T004
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d045492_T004
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_114
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_52


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 268 401
IPR011990 TPR-like_helical_dom_sf Gene3D 407 595
IPR011990 TPR-like_helical_dom_sf Gene3D 104 265
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 178 212
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 268 380
IPR002885 Pentatricopeptide_rpt Pfam 443 469
IPR002885 Pentatricopeptide_rpt Pfam 287 315
IPR002885 Pentatricopeptide_rpt Pfam 181 210
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 213 247
IPR002885 Pentatricopeptide_rpt NCBIfam 181 210
IPR002885 Pentatricopeptide_rpt NCBIfam 250 284
IPR002885 Pentatricopeptide_rpt NCBIfam 216 249
IPR002885 Pentatricopeptide_rpt Pfam 215 260
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 248 282
IPR002885 Pentatricopeptide_rpt TIGRFAM 250 284
IPR002885 Pentatricopeptide_rpt TIGRFAM 181 210
IPR002885 Pentatricopeptide_rpt TIGRFAM 216 249
IPR011990 TPR-like_helical_dom_sf Gene3D 268 401
IPR011990 TPR-like_helical_dom_sf Gene3D 407 595
IPR011990 TPR-like_helical_dom_sf Gene3D 104 265
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 268 380
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 248 282
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 213 247
IPR002885 Pentatricopeptide_rpt Pfam 235 296
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 178 212
IPR002885 Pentatricopeptide_rpt Pfam 443 469
IPR002885 Pentatricopeptide_rpt Pfam 181 210

No CAZYmes available for this sequence

No external refs found!