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Description : AMP-dependent synthetase and ligase family protein
Gene families : OG_01_0001646 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001646_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d045551_T032 | No neighbors in network |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d045551_T032 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_210 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR000873 | AMP-dep_Synth/Lig_com | Pfam | 75 | 409 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 770 | 947 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 948 | 1096 |
| IPR018391 | PQQ_beta_propeller_repeat | SMART | 798 | 830 |
| IPR018391 | PQQ_beta_propeller_repeat | SMART | 923 | 958 |
| IPR018391 | PQQ_beta_propeller_repeat | SMART | 967 | 999 |
| IPR018391 | PQQ_beta_propeller_repeat | SMART | 1012 | 1042 |
| IPR018391 | PQQ_beta_propeller_repeat | SMART | 839 | 872 |
| IPR002372 | PQQ_repeat | Pfam | 1019 | 1048 |
| IPR045851 | AMP-bd_C_sf | Gene3D | 449 | 562 |
| IPR011047 | Quinoprotein_ADH-like_supfam | SUPERFAMILY | 780 | 1084 |
| IPR002372 | PQQ_repeat | Pfam | 1138 | 1171 |
| IPR006162 | Ppantetheine_attach_site | ProSitePatterns | 603 | 618 |
| IPR036736 | ACP-like_sf | SUPERFAMILY | 574 | 636 |
| IPR002372 | PQQ_repeat | Pfam | 818 | 958 |
| IPR042099 | ANL_N_sf | Gene3D | 3 | 448 |
| IPR036736 | ACP-like_sf | Gene3D | 570 | 641 |
| IPR020845 | AMP-binding_CS | ProSitePatterns | 194 | 205 |
| IPR045851 | AMP-bd_C_sf | Gene3D | 449 | 562 |
| IPR018391 | PQQ_beta_propeller_repeat | SMART | 798 | 830 |
| IPR018391 | PQQ_beta_propeller_repeat | SMART | 923 | 958 |
| IPR018391 | PQQ_beta_propeller_repeat | SMART | 967 | 999 |
| IPR018391 | PQQ_beta_propeller_repeat | SMART | 1012 | 1042 |
| IPR018391 | PQQ_beta_propeller_repeat | SMART | 839 | 872 |
| IPR000873 | AMP-dep_Synth/Lig_com | Pfam | 75 | 453 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 770 | 947 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 948 | 1096 |
| IPR042099 | ANL_N_sf | Gene3D | 3 | 448 |
| IPR011047 | Quinoprotein_ADH-like_supfam | SUPERFAMILY | 780 | 1084 |
| IPR002372 | PQQ_repeat | Pfam | 848 | 881 |
| IPR020845 | AMP-binding_CS | ProSitePatterns | 194 | 205 |
| IPR036736 | ACP-like_sf | Gene3D | 570 | 641 |
| IPR036736 | ACP-like_sf | SUPERFAMILY | 574 | 636 |
| IPR002372 | PQQ_repeat | Pfam | 929 | 1078 |
| IPR006162 | Ppantetheine_attach_site | ProSitePatterns | 603 | 618 |
No CAZYmes available for this sequence
| No external refs found! |