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  5. Zm00001d045597_T016

Zm00001d045597_T016


Description : Rho GTPase activation protein (RhoGAP) with PH domain


Gene families : OG_01_0002498 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002498_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d045597_T016
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d045597_T016
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_99
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_105


Type GO Term Name Evidence Source
BP GO:0007165 signal transduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008936 Rho_GTPase_activation_prot Gene3D 182 404
IPR008936 Rho_GTPase_activation_prot SUPERFAMILY 211 406
IPR000198 RhoGAP_dom Pfam 212 355
IPR025757 MIP1_Leuzipper Pfam 603 682
IPR001849 PH_domain SMART 54 162
IPR011993 PH-like_dom_sf Gene3D 46 161
IPR001849 PH_domain Pfam 55 159
IPR000198 RhoGAP_dom ProSiteProfiles 203 402
IPR000198 RhoGAP_dom SMART 209 399
IPR001849 PH_domain ProSiteProfiles 53 160
IPR000198 RhoGAP_dom ProSiteProfiles 203 402
IPR011993 PH-like_dom_sf Gene3D 46 161
IPR000198 RhoGAP_dom SMART 209 399
IPR001849 PH_domain SMART 54 162
IPR008936 Rho_GTPase_activation_prot Gene3D 182 404
IPR025757 MIP1_Leuzipper Pfam 603 682
IPR001849 PH_domain Pfam 55 159
IPR001849 PH_domain ProSiteProfiles 53 160
IPR008936 Rho_GTPase_activation_prot SUPERFAMILY 211 406
IPR000198 RhoGAP_dom Pfam 212 355

No CAZYmes available for this sequence

No external refs found!