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  5. Zm00001d045611_T001

Zm00001d045611_T001


Description : MEI2-like protein 5


Gene families : OG_01_0002663 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002663_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d045611_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d045611_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_296
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_221


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom ProSiteProfiles 283 356
IPR000504 RRM_dom Pfam 285 350
IPR000504 RRM_dom Pfam 200 264
IPR000504 RRM_dom ProSiteProfiles 198 271
IPR034453 MEI2-like_RRM1 CDD 197 273
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 282 375
IPR034454 MEI2-like_RRM3 CDD 686 771
IPR000504 RRM_dom SMART 199 267
IPR000504 RRM_dom SMART 685 761
IPR000504 RRM_dom SMART 284 352
IPR035979 RBD_domain_sf SUPERFAMILY 195 359
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 188 281
IPR007201 Mei2-like_Rrm_C Pfam 683 779
IPR035979 RBD_domain_sf SUPERFAMILY 685 769
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 188 281
IPR034454 MEI2-like_RRM3 CDD 686 771
IPR000504 RRM_dom Pfam 200 264
IPR000504 RRM_dom Pfam 285 350
IPR000504 RRM_dom ProSiteProfiles 198 271
IPR034453 MEI2-like_RRM1 CDD 197 273
IPR035979 RBD_domain_sf SUPERFAMILY 685 769
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 282 375
IPR000504 RRM_dom SMART 199 267
IPR000504 RRM_dom SMART 685 761
IPR000504 RRM_dom SMART 284 352
IPR007201 Mei2-like_Rrm_C Pfam 683 779
IPR035979 RBD_domain_sf SUPERFAMILY 195 359
IPR000504 RRM_dom ProSiteProfiles 283 356

No CAZYmes available for this sequence

No external refs found!