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  5. Zm00001d045861_T001

Zm00001d045861_T001


Description : expansin B4


Gene families : OG_01_0006010 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006010_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d045861_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d045861_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_48
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_22


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007112 Expansin/allergen_DPBB_dom SMART 69 151
IPR036749 Expansin_CBD_sf Gene3D 158 260
IPR036908 RlpA-like_sf Gene3D 20 157
IPR036749 Expansin_CBD_sf SUPERFAMILY 163 256
IPR009009 RlpA-like_DPBB Pfam 70 151
IPR007117 Expansin_CBD ProSiteProfiles 174 256
IPR007117 Expansin_CBD Pfam 163 245
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 51 161
IPR007118 Expan_Lol_pI PRINTS 202 216
IPR007118 Expan_Lol_pI PRINTS 32 47
IPR007118 Expan_Lol_pI PRINTS 144 160
IPR007118 Expan_Lol_pI PRINTS 242 256
IPR007118 Expan_Lol_pI PRINTS 50 68
IPR007118 Expan_Lol_pI PRINTS 73 91
IPR005795 LolPI PRINTS 165 180
IPR005795 LolPI PRINTS 181 196
IPR005795 LolPI PRINTS 232 249
IPR005795 LolPI PRINTS 111 126
IPR005795 LolPI PRINTS 71 82
IPR005795 LolPI PRINTS 133 148
IPR036908 RlpA-like_sf SUPERFAMILY 22 160
IPR036749 Expansin_CBD_sf SUPERFAMILY 163 256
IPR036908 RlpA-like_sf SUPERFAMILY 22 160
IPR009009 RlpA-like_DPBB Pfam 70 151
IPR036749 Expansin_CBD_sf Gene3D 158 260
IPR007112 Expansin/allergen_DPBB_dom SMART 69 151
IPR007117 Expansin_CBD ProSiteProfiles 174 256
IPR036908 RlpA-like_sf Gene3D 20 157
IPR007117 Expansin_CBD Pfam 163 245
IPR007118 Expan_Lol_pI PRINTS 202 216
IPR007118 Expan_Lol_pI PRINTS 32 47
IPR007118 Expan_Lol_pI PRINTS 144 160
IPR007118 Expan_Lol_pI PRINTS 242 256
IPR007118 Expan_Lol_pI PRINTS 50 68
IPR007118 Expan_Lol_pI PRINTS 73 91
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 51 161
IPR005795 LolPI PRINTS 165 180
IPR005795 LolPI PRINTS 181 196
IPR005795 LolPI PRINTS 232 249
IPR005795 LolPI PRINTS 111 126
IPR005795 LolPI PRINTS 71 82
IPR005795 LolPI PRINTS 133 148

No CAZYmes available for this sequence

No external refs found!