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  5. Zm00001d046047_T001

Zm00001d046047_T001


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0005972 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005972_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d046047_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d046047_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_133
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_58


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016024 ARM-type_fold SUPERFAMILY 937 1247
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 440 709
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 11 214
IPR001680 WD40_rpt Pfam 497 538
IPR001680 WD40_rpt ProSiteProfiles 525 547
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 28 648
IPR001680 WD40_rpt SMART 1316 1351
IPR001680 WD40_rpt SMART 51 90
IPR001680 WD40_rpt SMART 589 636
IPR001680 WD40_rpt SMART 2 42
IPR001680 WD40_rpt SMART 490 538
IPR001680 WD40_rpt ProSiteProfiles 525 547
IPR016024 ARM-type_fold SUPERFAMILY 937 1247
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 11 214
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 440 709
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 28 648
IPR001680 WD40_rpt SMART 1316 1351
IPR001680 WD40_rpt SMART 51 90
IPR001680 WD40_rpt SMART 589 636
IPR001680 WD40_rpt SMART 2 42
IPR001680 WD40_rpt SMART 490 538

No CAZYmes available for this sequence

No external refs found!