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  5. Zm00001d046112_T002

Zm00001d046112_T002


Description : spermidine synthase 3


Gene families : OG_01_0000152 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000152_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d046112_T002 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d046112_T002
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_125


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001045 Spermi_synthase Hamap 53 354
IPR037163 Spermidine_synt_N_sf Gene3D 45 118
IPR001045 Spermi_synthase PANTHER 45 336
IPR029063 SAM-dependent_MTases_sf Gene3D 119 353
IPR035246 Spermidine_synt_N Pfam 74 120
IPR001045 Spermi_synthase NCBIfam 78 336
IPR029063 SAM-dependent_MTases_sf SUPERFAMILY 70 336
IPR030373 PABS_CS ProSitePatterns 145 158
IPR030374 PABS ProSiteProfiles 52 303
IPR035246 Spermidine_synt_N Pfam 74 120
IPR030373 PABS_CS ProSitePatterns 145 158
IPR001045 Spermi_synthase PANTHER 1 336
IPR001045 Spermi_synthase TIGRFAM 78 336
IPR029063 SAM-dependent_MTases_sf SUPERFAMILY 70 336
IPR037163 Spermidine_synt_N_sf Gene3D 45 118
IPR030374 PABS ProSiteProfiles 52 303
IPR001045 Spermi_synthase Hamap 53 354

No CAZYmes available for this sequence

No external refs found!