1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d046289_T001

Zm00001d046289_T001


Description : SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related


Gene families : OG_01_0040824 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0040824_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d046289_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d046289_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_12


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
MF GO:0061630 ubiquitin protein ligase activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001841 Znf_RING ProSiteProfiles 156 212
IPR007527 Znf_SWIM ProSiteProfiles 55 85
IPR007527 Znf_SWIM Pfam 55 84
IPR013083 Znf_RING/FYVE/PHD Gene3D 134 237
IPR039903 Zswim2 PANTHER 19 223
IPR001841 Znf_RING ProSiteProfiles 156 212
IPR013083 Znf_RING/FYVE/PHD Gene3D 134 237
IPR007527 Znf_SWIM Pfam 55 83
IPR007527 Znf_SWIM ProSiteProfiles 55 85
IPR039903 Zswim2 PANTHER 18 239

No CAZYmes available for this sequence

No external refs found!