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  5. Zm00001d046330_T002

Zm00001d046330_T002


Description : Plant L-ascorbate oxidase


Gene families : OG_01_0001614 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001614_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d046330_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d046330_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_16
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_222


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISM GOs from InterProScan
CC GO:0005576 extracellular region ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008972 Cupredoxin Gene3D 11 147
IPR011707 Cu-oxidase-like_N Pfam 36 146
IPR008972 Cupredoxin SUPERFAMILY 397 599
IPR008972 Cupredoxin Gene3D 395 607
IPR011706 Cu-oxidase_C Pfam 462 583
IPR008972 Cupredoxin Gene3D 155 393
IPR008972 Cupredoxin SUPERFAMILY 25 171
IPR001117 Cu-oxidase_2nd Pfam 162 357
IPR017760 L-ascorbate_oxidase_pln NCBIfam 219 600
IPR033138 Cu_oxidase_CS ProSitePatterns 560 580
IPR008972 Cupredoxin SUPERFAMILY 154 391
IPR034267 CuRO_3_AAO CDD 406 591
IPR034259 CuRO_1_AAO CDD 28 147
IPR002355 Cu_oxidase_Cu_BS ProSitePatterns 565 576
IPR045087 Cu-oxidase_fam PANTHER 37 579
IPR011706 Cu-oxidase_C Pfam 461 583
IPR034259 CuRO_1_AAO CDD 28 147
IPR034267 CuRO_3_AAO CDD 406 591
IPR008972 Cupredoxin SUPERFAMILY 397 599
IPR008972 Cupredoxin SUPERFAMILY 25 171
IPR008972 Cupredoxin Gene3D 395 607
IPR008972 Cupredoxin SUPERFAMILY 154 391
IPR001117 Cu-oxidase_2nd Pfam 163 357
IPR002355 Cu_oxidase_Cu_BS ProSitePatterns 565 576
IPR033138 Cu_oxidase_CS ProSitePatterns 560 580
IPR017760 L-ascorbate_oxidase_pln TIGRFAM 219 600
IPR008972 Cupredoxin Gene3D 155 393
IPR011707 Cu-oxidase-like_N Pfam 36 147
IPR008972 Cupredoxin Gene3D 11 147
IPR045087 Cu-oxidase_fam PANTHER 13 601
HMM Family HMM Length Query Length e-Value Query Start Query End
AA1 358 611 1e-108 45 576
No external refs found!