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  5. Zm00001d046438_T003

Zm00001d046438_T003


Description : Stabilizer of iron transporter SufD / Polynucleotidyl transferase


Gene families : OG_01_0000015 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000015_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d046438_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d046438_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_262
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_43


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012337 RNaseH-like_sf SUPERFAMILY 637 968
IPR003165 Piwi SMART 647 968
IPR032472 ArgoL2 Pfam 507 545
IPR003100 PAZ_dom Pfam 378 483
IPR036085 PAZ_dom_sf SUPERFAMILY 347 501
IPR014811 ArgoL1 SMART 267 352
IPR003165 Piwi ProSiteProfiles 647 968
IPR003100 PAZ_dom SMART 357 489
IPR036085 PAZ_dom_sf SUPERFAMILY 127 310
IPR003165 Piwi Pfam 648 967
IPR032474 Argonaute_N Pfam 124 258
IPR032473 Argonaute_Mid_dom Pfam 556 633
IPR014811 ArgoL1 Pfam 268 309
IPR036397 RNaseH_sf Gene3D 717 1005
IPR003100 PAZ_dom ProSiteProfiles 353 467
IPR045246 Piwi_ago-like CDD 517 967
IPR014811 ArgoL1 SMART 267 352
IPR036397 RNaseH_sf Gene3D 717 1005
IPR045246 Piwi_ago-like CDD 517 967
IPR036085 PAZ_dom_sf SUPERFAMILY 347 501
IPR003165 Piwi Pfam 648 967
IPR014811 ArgoL1 Pfam 268 309
IPR032474 Argonaute_N Pfam 124 258
IPR003165 Piwi SMART 647 968
IPR003100 PAZ_dom Pfam 358 483
IPR003100 PAZ_dom ProSiteProfiles 353 467
IPR032473 Argonaute_Mid_dom Pfam 556 633
IPR003165 Piwi ProSiteProfiles 647 968
IPR012337 RNaseH-like_sf SUPERFAMILY 637 968
IPR036085 PAZ_dom_sf SUPERFAMILY 127 310
IPR032472 ArgoL2 Pfam 507 545
IPR003100 PAZ_dom SMART 357 489

No CAZYmes available for this sequence

No external refs found!