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  5. Sevir.2G121000.1

Sevir.2G121000.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0002554 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002554_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G121000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G121000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_109
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_103


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006996 organelle organization ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019734 TPR_repeat SMART 950 983
IPR019734 TPR_repeat SMART 1034 1067
IPR019734 TPR_repeat SMART 992 1025
IPR033646 CLU-central Pfam 737 879
IPR033646 CLU-central CDD 739 878
IPR025697 CLU_dom ProSiteProfiles 332 608
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 915 1104
IPR027523 CLU_prot PANTHER 1 1908
IPR028275 CLU_N Pfam 45 115
IPR019734 TPR_repeat ProSiteProfiles 950 983
IPR011990 TPR-like_helical_dom_sf Gene3D 1023 1156
IPR011990 TPR-like_helical_dom_sf Gene3D 910 1022

No CAZYmes available for this sequence

No external refs found!