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  5. Zm00001d046509_T002

Zm00001d046509_T002


Description : Mitochondrial substrate carrier family protein


Gene families : OG_01_0003332 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003332_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d046509_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d046509_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_313
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_215


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 105 117
IPR002048 EF_hand_dom ProSiteProfiles 56 91
IPR023395 Mt_carrier_dom_sf SUPERFAMILY 265 544
IPR002048 EF_hand_dom Pfam 58 121
IPR002048 EF_hand_dom Pfam 127 224
IPR002067 Mit_carrier PRINTS 285 299
IPR002067 Mit_carrier PRINTS 325 345
IPR002067 Mit_carrier PRINTS 422 440
IPR002067 Mit_carrier PRINTS 377 395
IPR002067 Mit_carrier PRINTS 272 285
IPR002067 Mit_carrier PRINTS 469 491
IPR011992 EF-hand-dom_pair SUPERFAMILY 51 233
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 213 225
IPR002048 EF_hand_dom SMART 204 232
IPR002048 EF_hand_dom SMART 127 155
IPR002048 EF_hand_dom SMART 60 88
IPR002048 EF_hand_dom SMART 96 124
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 460 548
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 267 350
IPR002048 EF_hand_dom ProSiteProfiles 200 235
IPR002048 EF_hand_dom ProSiteProfiles 92 127
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 362 449
IPR023395 Mt_carrier_dom_sf Gene3D 263 550
IPR018108 Mitochondrial_sb/sol_carrier Pfam 462 549
IPR018108 Mitochondrial_sb/sol_carrier Pfam 363 449
IPR018108 Mitochondrial_sb/sol_carrier Pfam 266 354
IPR023395 Mt_carrier_dom_sf Gene3D 263 550
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 460 548
IPR002048 EF_hand_dom ProSiteProfiles 200 235
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 362 449
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 213 225
IPR023395 Mt_carrier_dom_sf SUPERFAMILY 265 544
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 267 350
IPR002048 EF_hand_dom ProSiteProfiles 92 127
IPR011992 EF-hand-dom_pair SUPERFAMILY 51 233
IPR002048 EF_hand_dom Pfam 212 228
IPR002048 EF_hand_dom ProSiteProfiles 56 91
IPR002048 EF_hand_dom Pfam 99 123
IPR002067 Mit_carrier PRINTS 285 299
IPR002067 Mit_carrier PRINTS 325 345
IPR002067 Mit_carrier PRINTS 422 440
IPR002067 Mit_carrier PRINTS 377 395
IPR002067 Mit_carrier PRINTS 272 285
IPR002067 Mit_carrier PRINTS 469 491
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 105 117
IPR018108 Mitochondrial_sb/sol_carrier Pfam 461 549
IPR018108 Mitochondrial_sb/sol_carrier Pfam 266 354
IPR018108 Mitochondrial_sb/sol_carrier Pfam 362 450
IPR002048 EF_hand_dom SMART 204 232
IPR002048 EF_hand_dom SMART 127 155
IPR002048 EF_hand_dom SMART 60 88
IPR002048 EF_hand_dom SMART 96 124

No CAZYmes available for this sequence

No external refs found!