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  5. Zm00001d046549_T002

Zm00001d046549_T002


Description : Ribosomal protein S5/Elongation factor G/III/V family protein


Gene families : OG_01_0007769 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007769_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d046549_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d046549_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_137
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_235


Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity ISM GOs from InterProScan
MF GO:0005525 GTP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014721 Ribsml_uS5_D2-typ_fold_subgr Gene3D 689 827
IPR000640 EFG_V-like SMART 832 921
IPR005517 Transl_elong_EFG/EF2_IV SMART 726 830
IPR000795 T_Tr_GTP-bd_dom Pfam 146 338
IPR044121 Snu114_GTP-bd CDD 147 348
IPR035655 U5-116kDa_C CDD 835 914
IPR020568 Ribosomal_Su5_D2-typ_SF SUPERFAMILY 682 834
IPR005225 Small_GTP-bd_dom NCBIfam 147 283
IPR035647 EFG_III/V SUPERFAMILY 835 922
IPR004161 EFTu-like_2 Pfam 514 588
IPR005517 Transl_elong_EFG/EF2_IV Pfam 731 829
IPR027417 P-loop_NTPase SUPERFAMILY 132 461
IPR035647 EFG_III/V SUPERFAMILY 608 680
IPR000795 T_Tr_GTP-bd_dom PRINTS 272 281
IPR000795 T_Tr_GTP-bd_dom PRINTS 220 230
IPR000795 T_Tr_GTP-bd_dom PRINTS 236 247
IPR000795 T_Tr_GTP-bd_dom PRINTS 148 161
IPR009000 Transl_B-barrel_sf SUPERFAMILY 466 592
IPR000640 EFG_V-like Pfam 832 920
IPR000795 T_Tr_GTP-bd_dom ProSiteProfiles 144 430
IPR027417 P-loop_NTPase Gene3D 140 342
IPR031950 EFTUD2_N Pfam 3 122
IPR031950 EFTUD2_N Pfam 3 122
IPR000640 EFG_V-like SMART 832 921
IPR035655 U5-116kDa_C CDD 835 914
IPR020568 Ribosomal_Su5_D2-typ_SF SUPERFAMILY 682 834
IPR000795 T_Tr_GTP-bd_dom PRINTS 272 281
IPR000795 T_Tr_GTP-bd_dom PRINTS 220 230
IPR000795 T_Tr_GTP-bd_dom PRINTS 236 247
IPR000795 T_Tr_GTP-bd_dom PRINTS 148 161
IPR000795 T_Tr_GTP-bd_dom ProSiteProfiles 144 430
IPR000640 EFG_V-like Pfam 832 920
IPR005517 Transl_elong_EFG/EF2_IV SMART 726 830
IPR005517 Transl_elong_EFG/EF2_IV Pfam 731 829
IPR035647 EFG_III/V SUPERFAMILY 608 680
IPR009000 Transl_B-barrel_sf SUPERFAMILY 466 592
IPR014721 Ribsml_uS5_D2-typ_fold_subgr Gene3D 689 827
IPR005225 Small_GTP-bd_dom TIGRFAM 147 283
IPR027417 P-loop_NTPase SUPERFAMILY 132 461
IPR035647 EFG_III/V SUPERFAMILY 835 922
IPR027417 P-loop_NTPase Gene3D 140 342
IPR004161 EFTu-like_2 Pfam 514 588
IPR000795 T_Tr_GTP-bd_dom Pfam 146 459
IPR044121 Snu114_GTP-bd CDD 147 348

No CAZYmes available for this sequence

No external refs found!