Zm00001d046554_T003

Description : RING domain ligase2

Gene families : OG_01_0003931 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003931_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d046554_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d046554_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_145
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_125

Type	GO Term	Name	Evidence	Source
BP	GO:0000209	protein polyubiquitination	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	ISM	GOs from InterProScan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0070534	protein K63-linked ubiquitination	ISM	GOs from InterProScan
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036465	vWFA_dom_sf	SUPERFAMILY	87	268
IPR001841	Znf_RING	SMART	402	434
IPR001841	Znf_RING	ProSiteProfiles	402	435
IPR010734	Copine_C	Pfam	110	324
IPR013083	Znf_RING/FYVE/PHD	Gene3D	386	445
IPR002035	VWF_A	SMART	85	288
IPR010734	Copine_C	Pfam	110	324
IPR013083	Znf_RING/FYVE/PHD	Gene3D	386	445
IPR001841	Znf_RING	ProSiteProfiles	402	435
IPR002035	VWF_A	SMART	85	288
IPR045317	RING-HC_RGLG1/2	CDD	401	445
IPR001841	Znf_RING	SMART	402	434
IPR036465	vWFA_dom_sf	SUPERFAMILY	87	268

No CAZYmes available for this sequence

External Links

No external refs found!