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  5. Zm00001d047028_T001

Zm00001d047028_T001


Description : BAH domain ;TFIIS helical bundle-like domain


Gene families : OG_01_0004975 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004975_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d047028_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d047028_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_122


Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding ISM GOs from InterProScan
CC GO:0005634 nucleus ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035441 TFIIS/LEDGF_dom_sf SUPERFAMILY 348 451
IPR035441 TFIIS/LEDGF_dom_sf Gene3D 309 447
IPR001025 BAH_dom Pfam 84 188
IPR017923 TFIIS_N Pfam 394 443
IPR003617 TFIIS/CRSP70_N_sub SMART 366 445
IPR017923 TFIIS_N ProSiteProfiles 360 446
IPR043151 BAH_sf Gene3D 75 295
IPR001025 BAH_dom SMART 83 197
IPR001025 BAH_dom ProSiteProfiles 83 197
IPR001025 BAH_dom SMART 83 197
IPR017923 TFIIS_N ProSiteProfiles 360 446
IPR043151 BAH_sf Gene3D 75 295
IPR035441 TFIIS/LEDGF_dom_sf Gene3D 309 447
IPR017923 TFIIS_N Pfam 394 443
IPR035441 TFIIS/LEDGF_dom_sf SUPERFAMILY 348 451
IPR003617 TFIIS/CRSP70_N_sub SMART 366 445
IPR001025 BAH_dom ProSiteProfiles 83 197

No CAZYmes available for this sequence

No external refs found!