Zm00001d047072_T001

Description : evolutionarily conserved C-terminal region 5

Gene families : OG_01_0002338 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002338_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d047072_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d047072_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_68
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_666

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004601	peroxidase activity	ISM	GOs from InterProScan
MF	GO:0004664	prephenate dehydratase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006558	L-phenylalanine metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009072	aromatic amino acid metabolic process	None	Extended
BP	GO:0009073	aromatic amino acid family biosynthetic process	None	Extended
BP	GO:0009094	L-phenylalanine biosynthetic process	ISM	GOs from InterProScan
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016209	antioxidant activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0020037	heme binding	ISM	GOs from InterProScan
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	None	Extended
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR007275	YTH_domain	ProSiteProfiles	306	443
IPR001086	Preph_deHydtase	Pfam	123	197
IPR045168	YTH_prot	PANTHER	188	433
IPR010255	Haem_peroxidase_sf	SUPERFAMILY	428	483
IPR001086	Preph_deHydtase	ProSiteProfiles	122	313
IPR007275	YTH_domain	Pfam	306	432
IPR007275	YTH_domain	CDD	307	431
IPR045168	YTH_prot	PANTHER	194	488
IPR001086	Preph_deHydtase	ProSiteProfiles	122	313
IPR007275	YTH_domain	Pfam	306	432
IPR045168	YTH_prot	PANTHER	18	191
IPR001086	Preph_deHydtase	Pfam	123	197
IPR010255	Haem_peroxidase_sf	SUPERFAMILY	428	483
IPR007275	YTH_domain	ProSiteProfiles	306	443

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d047072_T001

Expression Profile

Co-expression Networks

Functional Annotation