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  5. Zm00001d047142_T001

Zm00001d047142_T001


Description : expansin B2


Gene families : OG_01_0028067 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0028067_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d047142_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d047142_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_15


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036749 Expansin_CBD_sf Gene3D 166 269
IPR009009 RlpA-like_DPBB Pfam 80 159
IPR036908 RlpA-like_sf SUPERFAMILY 32 167
IPR005795 LolPI PRINTS 141 156
IPR005795 LolPI PRINTS 190 205
IPR005795 LolPI PRINTS 102 112
IPR005795 LolPI PRINTS 240 257
IPR005795 LolPI PRINTS 82 93
IPR005795 LolPI PRINTS 220 237
IPR005795 LolPI PRINTS 119 134
IPR005795 LolPI PRINTS 174 189
IPR007117 Expansin_CBD Pfam 172 253
IPR007112 Expansin/allergen_DPBB_dom SMART 80 159
IPR007117 Expansin_CBD ProSiteProfiles 183 264
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 63 169
IPR007118 Expan_Lol_pI PRINTS 42 57
IPR007118 Expan_Lol_pI PRINTS 250 264
IPR007118 Expan_Lol_pI PRINTS 152 168
IPR007118 Expan_Lol_pI PRINTS 211 225
IPR007118 Expan_Lol_pI PRINTS 84 102
IPR007118 Expan_Lol_pI PRINTS 62 80
IPR036749 Expansin_CBD_sf SUPERFAMILY 171 264
IPR036908 RlpA-like_sf Gene3D 25 165
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 63 169
IPR036749 Expansin_CBD_sf Gene3D 166 269
IPR036749 Expansin_CBD_sf SUPERFAMILY 171 264
IPR007117 Expansin_CBD ProSiteProfiles 183 264
IPR005795 LolPI PRINTS 141 156
IPR005795 LolPI PRINTS 190 205
IPR005795 LolPI PRINTS 102 112
IPR005795 LolPI PRINTS 240 257
IPR005795 LolPI PRINTS 82 93
IPR005795 LolPI PRINTS 220 237
IPR005795 LolPI PRINTS 119 134
IPR005795 LolPI PRINTS 174 189
IPR009009 RlpA-like_DPBB Pfam 80 158
IPR036908 RlpA-like_sf Gene3D 25 165
IPR007112 Expansin/allergen_DPBB_dom SMART 80 159
IPR036908 RlpA-like_sf SUPERFAMILY 32 167
IPR007118 Expan_Lol_pI PRINTS 42 57
IPR007118 Expan_Lol_pI PRINTS 250 264
IPR007118 Expan_Lol_pI PRINTS 152 168
IPR007118 Expan_Lol_pI PRINTS 211 225
IPR007118 Expan_Lol_pI PRINTS 84 102
IPR007118 Expan_Lol_pI PRINTS 62 80
IPR007117 Expansin_CBD Pfam 172 253

No CAZYmes available for this sequence

No external refs found!