Zm00001d047271_T002

Description : probable small nuclear ribonucleoprotein G

Gene families : OG_01_0003999 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003999_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d047271_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d047271_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_215
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_257

Type	GO Term	Name	Evidence	Source
BP	GO:0000387	spliceosomal snRNP assembly	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005681	spliceosomal complex	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022618	protein-RNA complex assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071826	protein-RNA complex organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001163	Sm_dom_euk/arc	SMART	8	72
IPR047575	Sm	ProSiteProfiles	5	76
IPR010920	LSM_dom_sf	SUPERFAMILY	9	76
IPR001163	Sm_dom_euk/arc	Pfam	9	71
IPR044641	Lsm7/SmG-like	PANTHER	1	78
IPR034098	Sm_G	CDD	6	74
IPR044641	Lsm7/SmG-like	PANTHER	1	79
IPR010920	LSM_dom_sf	SUPERFAMILY	9	76
IPR001163	Sm_dom_euk/arc	Pfam	9	71
IPR034098	Sm_G	CDD	6	74
IPR001163	Sm_dom_euk/arc	SMART	8	72

No CAZYmes available for this sequence

External Links

No external refs found!