1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d047292_T001

Zm00001d047292_T001


Description : SPFH/Band 7/PHB domain-containing membrane-associated protein family


Gene families : OG_01_0010295 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010295_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d047292_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d047292_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_257
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_270


Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum ISM GOs from InterProScan
MF GO:0031625 ubiquitin protein ligase binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR033294 Erlin1/2 PANTHER 50 366
IPR001107 Band_7 SMART 66 232
IPR036013 Band_7/SPFH_dom_sf SUPERFAMILY 98 230
IPR036013 Band_7/SPFH_dom_sf Gene3D 95 232
IPR033294 Erlin1/2 CDD 63 353
IPR001107 Band_7 Pfam 70 252
IPR033294 Erlin1/2 CDD 63 353
IPR036013 Band_7/SPFH_dom_sf SUPERFAMILY 98 230
IPR033294 Erlin1/2 PANTHER 30 369
IPR001107 Band_7 SMART 66 232
IPR001107 Band_7 Pfam 70 252
IPR036013 Band_7/SPFH_dom_sf Gene3D 95 232

No CAZYmes available for this sequence

No external refs found!