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  5. Zm00001d047382_T001

Zm00001d047382_T001


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0015623 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015623_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d047382_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d047382_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_307
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_132


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 42 405
IPR045151 DCAF8 PANTHER 19 491
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 47 402
IPR001680 WD40_rpt SMART 91 133
IPR001680 WD40_rpt SMART 319 361
IPR001680 WD40_rpt SMART 49 88
IPR001680 WD40_rpt SMART 194 230
IPR001680 WD40_rpt SMART 364 403
IPR001680 WD40_rpt SMART 137 178
IPR001680 WD40_rpt Pfam 54 88
IPR001680 WD40_rpt Pfam 365 402
IPR001680 WD40_rpt Pfam 324 360
IPR001680 WD40_rpt ProSiteProfiles 56 97
IPR001680 WD40_rpt ProSiteProfiles 56 97
IPR001680 WD40_rpt Pfam 324 360
IPR001680 WD40_rpt Pfam 54 88
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 47 402
IPR001680 WD40_rpt SMART 91 133
IPR001680 WD40_rpt SMART 319 361
IPR001680 WD40_rpt SMART 49 88
IPR001680 WD40_rpt SMART 137 178
IPR001680 WD40_rpt SMART 364 403
IPR001680 WD40_rpt SMART 194 230
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 42 405
IPR045151 DCAF8 PANTHER 18 464

No CAZYmes available for this sequence

No external refs found!