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  5. Zm00001d047636_T002

Zm00001d047636_T002


Description : SET domain-containing protein


Gene families : OG_01_0001658 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001658_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d047636_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d047636_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_145
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_143


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006338 chromatin remodeling ISM GOs from InterProScan
MF GO:0018024 obsolete histone lysine N-methyltransferase activity ISM GOs from InterProScan
CC GO:0031519 PcG protein complex ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR041355 Pre-SET_CXC Pfam 733 764
IPR046341 SET_dom_sf SUPERFAMILY 690 881
IPR025778 Hist-Lys_N-MeTrfase_plant ProSiteProfiles 2 881
IPR001005 SANT/Myb CDD 580 623
IPR001214 SET_dom ProSiteProfiles 795 888
IPR001214 SET_dom Pfam 806 883
IPR045318 EZH1/2-like PANTHER 12 882
IPR046341 SET_dom_sf Gene3D 695 887
IPR026489 CXC_dom ProSiteProfiles 676 780
IPR033467 Tesmin/TSO1-like_CXC SMART 729 766
IPR026489 CXC_dom ProSiteProfiles 676 780
IPR045318 EZH1/2-like PANTHER 6 885
IPR041355 Pre-SET_CXC Pfam 733 764
IPR033467 Tesmin/TSO1-like_CXC SMART 729 766
IPR001005 SANT/Myb CDD 580 623
IPR025778 Hist-Lys_N-MeTrfase_plant ProSiteProfiles 2 881
IPR001214 SET_dom ProSiteProfiles 795 888

No CAZYmes available for this sequence

No external refs found!