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Description : anaphase promoting complex 6
Gene families : OG_01_0010012 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010012_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d047979_T005 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d047979_T005 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_208 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR019734 | TPR_repeat | SMART | 520 | 553 |
| IPR019734 | TPR_repeat | SMART | 379 | 412 |
| IPR019734 | TPR_repeat | SMART | 486 | 519 |
| IPR019734 | TPR_repeat | SMART | 345 | 378 |
| IPR019734 | TPR_repeat | SMART | 447 | 480 |
| IPR019734 | TPR_repeat | SMART | 277 | 310 |
| IPR019734 | TPR_repeat | SMART | 413 | 446 |
| IPR019734 | TPR_repeat | SMART | 166 | 199 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 76 | 310 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 379 | 412 |
| IPR019734 | TPR_repeat | Pfam | 168 | 197 |
| IPR019734 | TPR_repeat | Pfam | 489 | 514 |
| IPR019734 | TPR_repeat | Pfam | 522 | 554 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 520 | 553 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 486 | 519 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 276 | 553 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 42 | 567 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 379 | 412 |
| IPR019734 | TPR_repeat | SMART | 520 | 553 |
| IPR019734 | TPR_repeat | SMART | 345 | 378 |
| IPR019734 | TPR_repeat | SMART | 486 | 519 |
| IPR019734 | TPR_repeat | SMART | 379 | 412 |
| IPR019734 | TPR_repeat | SMART | 447 | 480 |
| IPR019734 | TPR_repeat | SMART | 277 | 310 |
| IPR019734 | TPR_repeat | SMART | 413 | 446 |
| IPR019734 | TPR_repeat | SMART | 166 | 199 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 276 | 553 |
| IPR019734 | TPR_repeat | Pfam | 168 | 197 |
| IPR011716 | TPR-3 | Pfam | 454 | 473 |
| IPR011716 | TPR-3 | Pfam | 525 | 544 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 520 | 553 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 76 | 310 |
| IPR019734 | TPR_repeat | Pfam | 488 | 514 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 486 | 519 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 42 | 567 |
No CAZYmes available for this sequence
| No external refs found! |