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  5. Zm00001d048099_T003

Zm00001d048099_T003


Description : beta glucosidase 40


Gene families : OG_01_0001770 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001770_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d048099_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d048099_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_281
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_8


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001360 Glyco_hydro_1 PANTHER 33 256
IPR001360 Glyco_hydro_1 Pfam 34 256
IPR001360 Glyco_hydro_1 Pfam 410 537
IPR033132 Glyco_hydro_1_N_CS ProSitePatterns 40 54
IPR001360 Glyco_hydro_1 PRINTS 485 502
IPR001360 Glyco_hydro_1 PRINTS 440 448
IPR001360 Glyco_hydro_1 PRINTS 509 521
IPR001360 Glyco_hydro_1 PRINTS 463 474
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 35 538
IPR001360 Glyco_hydro_1 Pfam 409 537
IPR001360 Glyco_hydro_1 Pfam 34 256
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 35 538
IPR033132 Glyco_hydro_1_N_CS ProSitePatterns 40 54
IPR001360 Glyco_hydro_1 PRINTS 485 502
IPR001360 Glyco_hydro_1 PRINTS 440 448
IPR001360 Glyco_hydro_1 PRINTS 509 521
IPR001360 Glyco_hydro_1 PRINTS 463 474
IPR001360 Glyco_hydro_1 PANTHER 6 538
HMM Family HMM Length Query Length e-Value Query Start Query End
GH1 429 540 4.3e-99 34 262
No external refs found!