Zm00001d048100_T004

Description : SecY protein transport family protein

Gene families : OG_01_0004674 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004674_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d048100_T004
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d048100_T004
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_213

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	ISM	GOs from InterProScan
CC	GO:0016020	membrane	ISM	GOs from InterProScan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR030659	SecY_CS	ProSitePatterns	84	103
IPR023201	SecY_dom_sf	Gene3D	16	408
IPR023201	SecY_dom_sf	Gene3D	427	510
IPR019561	Translocon_Sec61/SecY_plug_dom	Pfam	49	83
IPR002208	SecY/SEC61-alpha	NCBIfam	38	404
IPR002208	SecY/SEC61-alpha	Pfam	84	405
IPR002208	SecY/SEC61-alpha	Pfam	433	496
IPR023201	SecY_dom_sf	SUPERFAMILY	433	502
IPR002208	SecY/SEC61-alpha	PIRSF	429	507
IPR002208	SecY/SEC61-alpha	PIRSF	15	408
IPR002208	SecY/SEC61-alpha	PANTHER	27	506
IPR023201	SecY_dom_sf	SUPERFAMILY	17	404
IPR023201	SecY_dom_sf	SUPERFAMILY	433	502
IPR002208	SecY/SEC61-alpha	TIGRFAM	38	404
IPR002208	SecY/SEC61-alpha	PIRSF	429	507
IPR002208	SecY/SEC61-alpha	PIRSF	15	408
IPR002208	SecY/SEC61-alpha	PANTHER	433	512
IPR023201	SecY_dom_sf	SUPERFAMILY	17	404
IPR002208	SecY/SEC61-alpha	Pfam	433	495
IPR002208	SecY/SEC61-alpha	Pfam	84	405
IPR019561	Translocon_Sec61/SecY_plug_dom	Pfam	49	83
IPR030659	SecY_CS	ProSitePatterns	84	103
IPR023201	SecY_dom_sf	Gene3D	16	408
IPR023201	SecY_dom_sf	Gene3D	427	510
IPR002208	SecY/SEC61-alpha	PANTHER	8	405

No CAZYmes available for this sequence

External Links

No external refs found!